BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005G03LP1|AL425416
(1000 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1332 1798 0.0
>3x_Contig1332
Length = 6394
Score = 1798 bits (904), Expect = 0.0
Identities = 962/978 (98%), Gaps = 5/978 (0%)
Strand = Plus / Plus
Query: 1 gcctgtcacttttatatgaaatttcaacgaaatcgaatttaataaaaaattaattactac 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1438 gcctgttacttttatatgaaatttcaacgaaatcgaatttaataaaaaattaattactac 1497
Query: 61 tctgtttttaaatcaaacacagcgagaaattgttacgatattcgttcatcgggtggcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1498 tctgtttttaaatcaaacacagcgagaaattgttacgatattcgttcatcgggtggcaaa 1557
Query: 121 acagagctattgcaccagcaaccaaggagccattgagaatgaactttggcaatcaaacac 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1558 acagagctattgcaccagcaaccaaggagctattgagaatgaactttggcaatcaaacac 1617
Query: 181 ctacyattgttgtccttaaggagggaaccgaattcctcccagggtagaggccaaatcatc 240
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1618 ctactattgttgtccttaaggagggaaccga-ttcctcccagggtagaggccaaatcatc 1676
Query: 241 tctaacatcaatgcctgtttggcaattcaagaaacgttgaaaccaactttgggtccgtta 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1677 tctaacatcaatgcctgtttggcaattcaagatacgttgaaaccaactttgggtccgtta 1736
Query: 301 ggttctgatatattgattgtgacaacyaacggtaagacgactatctccaacgatggtgcc 360
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 1737 ggttctgatatattgattgtgacatctaacggtaagacgactatctccaacgatggtgct 1796
Query: 361 acaattcttaaattattagacgttgttcatccagcagcgaagacactagttgacatttcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1797 acaattcttaaattattagacgttgttcatccagcagcgaagacactagttgacatttcc 1856
Query: 421 agagcccaggatgctgaagttggtgatggtaccacaagtgtgaccattttagctggtgaa 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1857 agagctcaggatgctgaagttggtgatggtaccacaagtgtgaccattttagctggtgaa 1916
Query: 481 ttgatgaaggaagcaaagcctttcttagaagaaggaatctcttctcatattatcatgaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1917 ttgatgaaggaagcaaagcctttcttagaagaaggaatctcttctcatattatcatgaag 1976
Query: 541 ggttacagaaaggcagtagaactggctgtagcyaaaatcaatgaaattgcggttgatatt 600
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1977 ggttacagaaaggcagtagaactggctgtagctaaaatcaatgaaattgcggttgatatt 2036
Query: 601 tccaatgaaaacaattcaagagatttgctagaacgttgtgctagaaccgcgatgtcctcy 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2037 tccaatgaaaacaattcaagagatttgctagaacgttgtgctagaaccgcgatgtcctct 2096
Query: 661 aagttaatcaataataacgctgatttctttgtgaagatgtgtgtggatgcagtgttaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2097 aagttaatcaataataacgctgatttctttgtgaagatgtgtgtggatgcagtgttaaca 2156
Query: 721 ttagatcaagaagatcttgatgataaattgattggtatcaaaaagatttctggtggggct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2157 ttagatcaagaagatcttgatgataaattgattggtatcaaaaagatttctggtggggct 2216
Query: 781 atggaagattctttattcgttgacggtgtcgccttccaaaagactttctcgtacgctggg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2217 atggaagattctttattcgttgacggtgtcgccttccaaaagactttctcgtacgctggg 2276
Query: 841 ttcgaacaacaaccaaagactttcaagaatcctaagatcctttctctaaacgttgaattt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2277 ttcgaacaacaaccaaagactttcaagaatcctaagatcctttctctaaacgttgaa-tt 2335
Query: 901 agaactaaaggcagaaaaagataatgcagaagtgagagttg-acatgtcg-agatta-cm 957
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
Sbjct: 2336 agaactaaaggcagaaaaagataatgcagaagtgagagttgaacatgtcgaagattacca 2395
Query: 958 agctatcgttgatgctga 975
||||||||||||||||||
Sbjct: 2396 agctatcgttgatgctga 2413
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8324
Number of Sequences: 1807
Number of extensions: 8324
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 1
length of query: 1000
length of database: 10,358,551
effective HSP length: 16
effective length of query: 984
effective length of database: 10,329,639
effective search space: 10164364776
effective search space used: 10164364776
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)